filter_ontology: Filter Ontology

View source: R/Utils.R

filter_ontologyR Documentation

Filter Ontology

Description

Filter ontology to only contain terms between given min. and max. sizes.

Usage

filter_ontology(gmt, min_nr_of_elements = NULL, max_nr_of_elements = NULL)

Arguments

gmt

A data frame which contains the data, imported from a GMT file.

min_nr_of_elements

minimum size of term. Default 20 percent from quantile on term size distribution.

max_nr_of_elements

maximum size of term. Default 80 percent from quantile on term size distribution.

Value

Return data frame with model from specific location.


koralgooll/MulEA documentation built on Nov. 23, 2023, 3:27 p.m.