These functions provides an R interface to allow users to get the names/ids of organisms, databases, pathways that are available through KEGG REST services.
Some queries agsinst the KEGG databases require abbreviations of
organisms supported by KEGG. Although the abbreviations normally
consist of three letters by truncating the first letter of the genus
name and the first two letters of the species name (e. g. hsp for Homo
list.organisms obtains the abbreviations using
the service provided by KEGG REST to make sure the abbreviations are
correct and the organisms are indeed supported by KEGG databases.
list.organisms returns a named vector with names of the
vector being the scientific names and the values of the vector being the
abbreviations used by KEGG for the organisms supported by the
list.pathways returns a named vector with names of the
vector being textual descriptions of KEGG pathways and the values of
the vector being the ids used by KEGG to represent pathways.
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