| annotateMaf | 'annotateMaf' package |
| brca_exchange_annotate_maf | Annotate BRCA1/2 variants |
| brca_exchange_variants | BRCA exchange variants |
| coding_mutations | Variant classification of coding mutations |
| hotspot_annotate_maf | Annotate somatic hotspot mutations |
| hotspots | Mutation hotspots |
| oncokb_annotate_maf | Annotate OncoKB levels of evidence |
| truncating_mutations | Variant classification of truncating mutations |
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