compactness: Calculates compactness of network based on the presence of...
In kr-swapnil/NetVA: An R package for network vulnerability and influence analysis
compactness R Documentation
Calculates compactness of network based on the presence of all maximal 3-node cliques in complete network
Or
Determine network compactness after removal of a node of interest
Description
Calculates compactness of network based on the presence of all maximal 3-node cliques in complete network
Or
Determine network compactness after removal of a node of interest
Usage
compactness(v = NULL, net, p = 0.1)
Arguments
v
A node/protein name which will be removed (by default NULL, i.e., none of nodes will be removed and the compactness value
will be of complete network).
net
An igraph graph object.
p
A penalty term which measures the inaccuracy of the network interaction. The default value of p is set to 0.1.
Value
A single numeric value.
kr-swapnil/NetVA documentation built on April 15, 2024, 8:32 p.m.
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| compactness | R Documentation |
Calculates compactness of network based on the presence of all maximal 3-node cliques in complete network Or Determine network compactness after removal of a node of interest
Description
Calculates compactness of network based on the presence of all maximal 3-node cliques in complete network Or Determine network compactness after removal of a node of interest
Usage
compactness(v = NULL, net, p = 0.1)
Arguments
v |
A node/protein name which will be removed (by default NULL, i.e., none of nodes will be removed and the compactness value will be of complete network). |
net |
An igraph graph object. |
p |
A penalty term which measures the inaccuracy of the network interaction. The default value of p is set to 0.1. |
Value
A single numeric value.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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