addKnot.binary | addKnot.binary |
addKnot.gaussian | addKnot.gaussian |
bayes.splines.fit | bayes.splines.fit |
bayes.splines.iteration | bayes.splines.iteration |
bayes.splines.model.options | bayes.splines.model.options |
calculateDropoutTimeSpecificSlope | Calculate the estimated slope at the given dropout times |
calculateMarginalSlope | Calculate the marginal slope at the given iteration |
dirichlet.fit | dirichlet.fit |
dirichlet.iteration | dirichlet.iteration |
dirichlet.model.options | dirichlet.model.options |
getInitialEstimatesCovariates | Fit a simple linear model to get initial values for... |
getInitialEstimatesTheta | Fit a simple linear model to get initial values for... |
informativeDropout | informativeDropout |
informativeDropout.bayes.dirichlet | infortmativeDropout.bayes.dirichlet |
informativeDropout.bayes.splines | Fit a varying coefficient model for longitudinal studies with... |
informativeDropout.mixed | infortmativeDropout.mixed |
mixed.model.options | Model options for the mixed model fit. A convenience wrapper... |
moveKnot.binary | Add a new knot and use a Metropolis-Hastings step to... |
moveKnot.gaussian | Add a new knot and use a Metropolis-Hastings step to... |
plot.density | density plot for a parameter |
plot.density.dirichlet.fit | plot.density.dirichlet.fit |
plot.slopeByDropout | plot the slope by dropout time |
plot.slopeByDropout.bayes.splines.fit | plot.slopeByDropout.bayes.splines.fit |
plot.slopeByDropout.dirichlet.fit | plot.slopeByDropout.dirichlet.fit |
plot.trace | trace plot for a parameter |
plot.trace.bayes.splines.fit | Create a trace plot of the specified parameter |
plot.trace.dirichlet.fit | plot.trace.dirichlet.fit |
prob.acceptance | calculate the acceptance probability for a given update step... |
removeKnot.binary | Remove a knot and use a Metropolis-Hastings step to determine... |
removeKnot.gaussian | Remove a knot and use a Metropolis-Hastings step to determine... |
sensitivity | perform sensitivity analysis on the slope results |
sensitivity.bayes.splines.fit | sensitivity.bayes.splines.fit |
sensitivity.dirichlet.fit | sensitivity.dirichlet.fit |
sim_1 | A simulated data set based on the Multicenter Aids study... |
summary.bayes.splines.fit | Summarize a Bayesian spline model run |
summary.dirichlet.fit | summary.dirichlet.fit |
summary.sensitivity.bayes.splines.fit | summary.sensitivity.bayes.splines.fit |
treated_hiv | A simulated data set based on the Multicenter Aids study... |
untreated_hiv | Longitudinal data of HIV in men who are both users and... |
updateCovarianceParameters.binary | Add a new knot and use a Metropolis-Hastings step to... |
updateCovarianceParameters.gaussian | Add a new knot and use a Metropolis-Hastings step to... |
updateFixedEffects.binary | Add a new knot and use a Metropolis-Hastings step to... |
updateFixedEffectsCovariates.binary | Update the regression coefficients related to common... |
updateFixedEffectsCovariates.gaussian | Update the regression coefficients related to common... |
updateFixedEffects.gaussian | Add a new knot and use a Metropolis-Hastings step to... |
updateRandomEffects.binary | Update the random effects |
updateRandomEffects.gaussian | Update the random effects |
wls.binary | Single iteration of weighted least squares |
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