computeClusteringHclust: Compute 'hclust' objects

In kueckelj/confuns: Convenience Functions

Compute hclust objects

Description

Computes hclust objects for all combinations of distance and agglomeration methods. Does not store distance matrices in the object!

Usage

computeClusteringHclust(object, ...)

## S4 method for signature 'Clustering'
computeClusteringHclust(
  object,
  methods_dist = "euclidean",
  methods_aggl = "ward.D",
  verbose = TRUE,
  ...
)

## S4 method for signature 'Analysis'
computeClusteringHclust(
  object,
  methods_dist = "euclidean",
  methods_aggl = "ward.D",
  verbose = TRUE
)

Arguments

object	Any object for whose class a method has been defined.
verbose	Logical. If set to TRUE informative messages regarding the computational progress will be printed. (Warning messages will always be printed.)

Value

The input object.

Note

If you want to store distance matrices use computeDistanceMatrices() and subsequently agglomerateHierarchicalTrees(). computeClusteringHclust() is a wrapper around both that skips storing the distance matrices.

kueckelj/confuns documentation built on June 28, 2024, 9:19 a.m.