computeTSNE: Compute TSNE

In kueckelj/confuns: Convenience Functions

Compute TSNE

Description

Computes t stochastic neighbour embedding stores the embedding in form of a data.frame.

Usage

computeTSNE(object, ...)

## S4 method for signature 'DimRed'
computeTSNE(object, n_dims = 2, verbose = TRUE, ...)

## S4 method for signature 'Analysis'
computeTSNE(object, n_dims, verbose = TRUE)

Arguments

object	Any object for whose class a method has been defined.
...	Additional arguments given to tsne::tsne().
n_dims	Numeric value. Integer that indicates the number of dimensions of the resulting embedding. Must be lower than the number of numeric variables based on which principal components are computed. Given to argument k of function tsne::tsne().
verbose	Logical. If set to TRUE informative messages regarding the computational progress will be printed. (Warning messages will always be printed.)

kueckelj/confuns documentation built on July 4, 2024, 4:53 p.m.