Man pages for kwanjeeraw/grinn
graph database and R package for omics data integration

combineNetworkCombine two networks
convertToGrinnIDConvert other database IDs to Neo4j internal IDs and grinn...
curlRequestCypherExecute Cypher query
curlRequestUrlToDFExecute query from URI
curlRequestUrlToListExecute query from URI
fetchCorrGrinnNetworkCompute a weighted correlation network and expand the network...
fetchCorrNetworkCompute a weighted correlation network
fetchDiffCorrGrinnNetworkCompute a differential correlation network and expand the...
fetchDiffCorrNetworkCompute a differential correlation network
fetchGrinnCorrNetworkCombine a grinn network queried from Grinn internal database...
fetchGrinnDiffCorrNetworkCombine a grinn network queried from grinn internal database...
fetchGrinnModuNetworkCombine a grinn network queried from Grinn internal database...
fetchGrinnNetworkCompute an integrated network using information from Grinn...
fetchGrinnPtCorrNetworkCombine a grinn network queried from Grinn internal database...
fetchModuGrinnNetworkCompute a network module correlated to a phenotypic feature...
fetchNodeQuery for an entity or list of entities from grinn internal...
fetchNodeRelation'fetchNodeRelation' format get node relationships
fetchPtCorrGrinnNetworkCompute a partial correlation network and expand the network...
fetchPtCorrNetworkCompute partial correlation network
fetchRelation'fetchRelation' get path information
fetchWGCNAModuleCompute a network module correlated to a phenotypic feature
formatNetworkOutput'formatNetworkOutput' format resulting network
formatNodeOutput'formatNodeOutput' format resulting node
formatWGCNAModule'formatWGCNAModule' format resulting WGCNA module
getCorrAdjacencycompute correlation coefficients, pvalues and directions
getGrinnDbGet Grinn database location
grinnShinyStart GUI
setGrinnDbSet Grinn database location
kwanjeeraw/grinn documentation built on May 21, 2017, 7:28 a.m.