pheat: Build a pheatmap object in stages

In kylebittinger/pheatbuilder: Build a heatmap in stages

Description

Build a pheatmap object in stages

Usage

pheat(x, ...)

## S3 method for class 'matrix'
pheat(x)

## S3 method for class 'data.frame'
pheat(x, rownames_in = 1)

Arguments

x	A matrix or data frame of data for the heatmap
...	Additional arguments passed to other methods
rownames_in	The column of the data frame that gives the rownames for the heatmap. Can be specified as an integer index or with the column name in quotes. Set to NULL to use the existing rownames of the data frame.

Examples

pheat(vendor_props)

# Re-format heatmap data in a data frame
vendor_props_df <- data.frame(
  taxon_id = rownames(vendor_props),
  vendor_props[,1:15])
rownames(vendor_props_df) <- NULL
pheat(vendor_props_df, rownames_in = "taxon_id")

kylebittinger/pheatbuilder documentation built on Dec. 21, 2021, 8:45 a.m.