Man pages for kylec/SeqTools
helper functions for analysis
| basic_analysis_report_opt | basic analysis report template |
| calcZ | Transform expression matrix into z score |
| calcZref | Transform expression matrix into z score based on reference... |
| combine_probes_2_gene | Combine multiple probes to gene level expression using svd |
| convertGeneSymbols | Convert gene names |
| load_rsem | Load RSEM gene expression |
| oneToManyOperation | one to many operations helper for combine_probes_2_genes... |
| quantnorm | Quantile normalize function |
| quantnormref | Quantile normalize function using reference expression matrix |
| upperQuartile | Upper Quartile normalize expression matrix |
| write.df | simplfy options for writing data frame |
