load_rsem: Load RSEM gene expression

Description Usage Arguments Value Examples

Description

Load RSEM gene expression

Usage

1
load_rsem(rsem_path, count_type = NULL)

Arguments

path

to rsem data

count

type: "expected_count"(default), "tmp", "fpkm"

Value

a data.frame of rsem expected counts (no transformations whatsoever). rownames are genes, colnames are samples

Examples

1
exprs = load_rsem("/path/rsem/")

kylec/SeqTools documentation built on May 20, 2019, 7:31 p.m.