Files in l-gorman/rhomis-R-package

Essential Processes for RHoMIS Data

LICENSE.md R/00-extract-raw-data.R R/01-extract-units.R R/02-calculate-prices.R R/03-calculate-indicators.R R/AuthenticateUser.R R/CalorieCalculations.R R/ChangesOnFarm.R R/CleanColumnNames.R R/CleanRawData.R R/ConnectToONA.R R/ConnectToSurveyBuilder.R R/CreateXLSForm.R R/CropAndLivestockDiversity.R R/CropCalculations.R R/CurrencyConversion.R R/DataContentsCheck.R R/DataReformatting.R R/DietaryDiversity.R R/ExtractNewValues.R R/Fertiliser.R R/FoodSecurity.R R/GenderControlAll.R R/GenerateMockResponses.R R/HouseholdSize.R R/LandSize.R R/LivestockCalculations.R R/MetaData.R R/Modules.R R/NTFP.R R/ProgressOutOfPoverty.R R/QualityChecking.R R/ReformatLoops.R R/RunAll.R R/TotalIncomes.R R/UnitsAndConversions.R R/ValueCalculations.R R/ValueOrientations.R R/WaterSanitationAndHygiene.R R/WildFoods.R R/config_package_vars.R R/data.R R/redirectModules.R R/rhomisApiConnection.R R/utils-create-downloadable-folder.R R/utils-csv-data.R R/utils-mongodb.R R/utils-odk-central.R R/utils-pipe.R R/zzz.R README.md book/01-processing-projects.Rmd book/02-data-and-outputs.Rmd book/03-indicator-explanations.Rmd book/04-issues.Rmd book/README.md book/index.Rmd data-raw/country_codes.R data-raw/currency_conversion.R data-raw/function-mapping.R data-raw/indicator-mapping.R data-raw/modules.R data-raw/ntfp-types.R data-raw/proportion_conversions.R data-raw/sample-raw-dataset.R data-raw/units_and_conversions.R inst/04-land-proportions.R inst/sample_central_project/01-extract-values-and-initial-cleaning.R inst/sample_central_project/02-calculate-initial-indicators-and-prices.R inst/sample_central_project/03-calculate-final-indicators.R inst/sample_central_project/04-delete-outputs.R inst/sample_central_project/README.md inst/sample_local_project/00-setup.R inst/sample_local_project/01-unit-extraction.R inst/sample_local_project/02-price-calulation.R inst/sample_local_project/03-indicator-calculation.R inst/sample_local_project/04-data-exploration.R inst/sample_local_project/README.md inst/scripts/exploring-metadata.R inst/scripts/extract_units.R inst/scripts/local_processing/calculate_indicators.R inst/scripts/local_processing/calculate_prices.R inst/scripts/local_processing/extract_values.R inst/scripts/process_data.R man/add_column_after_specific_column.Rd man/add_data_to_db.Rd man/add_data_to_project_list.Rd man/add_function_to_list.Rd man/add_gendered_indicator.Rd man/add_headers_and_footers.Rd man/add_indicator.Rd man/adding_looped_data.Rd man/adding_project_to_list.Rd man/apply_conversion_factor_to_columns.Rd man/apply_conversion_factor_to_columns_multiple_projects.Rd man/average_good_and_bad_season.Rd man/calculate_MAE.Rd man/calculate_fp_harvest.Rd man/calculate_household_size_members.Rd man/calculate_indicators.Rd man/calculate_indicators_local.Rd man/calculate_indicators_server.Rd man/calculate_prices_and_indicator_local.Rd man/calculate_prices_csv.Rd man/calculate_prices_server.Rd man/calculate_values_gender_and_fa_local.Rd man/calorie_calculations.Rd man/central_loops_to_rhomis_loops.Rd man/central_results_to_df.Rd man/check_columns_in_data.Rd man/check_columns_individual.Rd man/check_columns_loop.Rd man/check_existing_calorie_conversions.Rd man/check_existing_conversions.Rd man/check_val_in_list.Rd man/clean_column_names.Rd man/clean_json_string.Rd man/clean_tlu_column_names.Rd man/collapse_list_of_tibbles.Rd man/connect_to_db.Rd man/convert_all_columns_to_lower_case.Rd man/convert_all_currencies.Rd man/convert_column_to_lowercase.Rd man/convert_crop_sold_units.Rd man/convert_crop_yield_units.Rd man/convert_new_values_to_tibble.Rd man/convert_ntfp_units.Rd man/count_collection.Rd man/country_codes.Rd man/country_to_iso2.Rd man/create_module.Rd man/create_project.Rd man/crop_amount_to_kg.Rd man/crop_calculations_all.Rd man/crop_calories.Rd man/crop_diversity.Rd man/crop_gender_calculations.Rd man/crop_harvest_calculations.Rd man/crop_harvest_single_loop.Rd man/crop_income_calculations.Rd man/crop_name_to_std.Rd man/crop_price_to_lcu_per_kg.Rd man/crop_proportions_all.Rd man/crop_sold_and_consumed_calculation.Rd man/currency_conversion.Rd man/currency_conversion_factor.Rd man/data_frame_to_json.Rd man/delete_project.Rd man/dependency_check.Rd man/egg_income_calculations.Rd man/eggs_amount_calculations.Rd man/eggs_amount_to_pieces_per_year.Rd man/eggs_calories.Rd man/eggs_price_per_egg_to_numeric.Rd man/eggs_price_to_lcu_per_year.Rd man/eggs_proportions_all.Rd man/eggs_sold_and_consumed_calculations.Rd man/eggs_swap_per_animal_units.Rd man/extract_all_new_values.Rd man/extract_calorie_conversion_data_frames.Rd man/extract_calorie_values.Rd man/extract_calorie_values_by_project.Rd man/extract_form_metadata.Rd man/extract_fp_price_and_calorie_conv.Rd man/extract_new_core_units.Rd man/extract_new_values.Rd man/extract_project_values.Rd man/extract_raw_data_server.Rd man/extract_secondary_unit_set.Rd man/extract_secondary_units.Rd man/extract_units_and_conversions.Rd man/extract_units_and_conversions_csv.Rd man/extract_units_and_conversions_server.Rd man/extract_units_data_frames.Rd man/extract_units_from_db.Rd man/extract_values_by_project.Rd man/extract_values_local.Rd man/fertiliser_amount_to_kg.Rd man/fies_score.Rd man/find_collection.Rd man/find_d3_dependencies_network.Rd man/find_db_units.Rd man/find_loop_number_and_extract_values.Rd man/find_nested_dependencies_list.Rd man/find_nested_dependencies_network.Rd man/find_number_of_loops.Rd man/find_unique_case.Rd man/find_unique_values.Rd man/food_security_calculations.Rd man/fp_amount_to_kg.Rd man/fp_calculations_all.Rd man/fp_income_calculations.Rd man/fp_income_per_freq_to_lcu_per_year.Rd man/fp_products.Rd man/fp_proportions_all.Rd man/function_list.Rd man/gender_control_props.Rd man/gender_control_summary.Rd man/gender_split_livestock.Rd man/gendered_off_farm_income_indicator.Rd man/gendered_off_farm_income_split.Rd man/generateData.Rd man/generate_mock_response.Rd man/generate_random_row.Rd man/generate_tab_spaces.Rd man/get_email_token.Rd man/get_forms.Rd man/get_household_size_conversion.Rd man/get_individual_survey_builder_project.Rd man/get_project_id_from_name.Rd man/get_projects.Rd man/get_secondary_conversions.Rd man/get_submission_data.Rd man/get_submission_xml.Rd man/get_submissions_list.Rd man/get_survey_builder_projects.Rd man/get_users.Rd man/get_xls_form.Rd man/get_xls_survey_file.Rd man/get_xml_form_id_from_name.Rd man/hdds_10_test.Rd man/hdds_14_test.Rd man/hdds_calc.Rd man/honey_amount_calculation.Rd man/honey_amount_sold_and_consumed_calculations.Rd man/honey_amount_to_l.Rd man/honey_calories.Rd man/honey_income_calculations.Rd man/honey_proportions_all.Rd man/household_roster_to_categories.Rd man/household_roster_to_wide.Rd man/identify_number_of_heads_for_livestock_loops.Rd man/identify_person_category.Rd man/identify_repeat_columns.Rd man/identify_repeat_locations.Rd man/indicator_list.Rd man/indicator_mapping_to_df.Rd man/insert_gender_columns_in_core_data.Rd man/land_area_to_ha.Rd man/land_size_calculation.Rd man/livestock_calculations_all.Rd man/livestock_count_to_tlu.Rd man/livestock_diversity.Rd man/livestock_name_to_std.Rd man/livestock_tlu_calculations.Rd man/livestock_weight_kg.Rd man/load_all_db_units.Rd man/load_calorie_conversions.Rd man/load_local_units.Rd man/load_rhomis_central.Rd man/load_rhomis_csv.Rd man/load_survey_csv.Rd man/login.Rd man/loop_to_column_conversion.Rd man/make_id_columns.Rd man/make_new_dataset.Rd man/make_per_project_conversion_tibble.Rd man/map_to_wide_format.Rd man/meat_amount_calculation.Rd man/meat_calories.Rd man/meat_prices.Rd man/meat_sold_and_consumed_calculation.Rd man/meat_uses.Rd man/merge_and_simplify_core_values.Rd man/merge_original_and_other_unit_single_pair.Rd man/merge_original_and_other_units.Rd man/milk_amount_calculations.Rd man/milk_amount_to_l.Rd man/milk_calories.Rd man/milk_income_calculations.Rd man/milk_price_time_units_conversion.Rd man/milk_price_to_lcu_per_l.Rd man/milk_proportions_all.Rd man/milk_sold_and_consumed_calculations.Rd man/milk_swap_per_animal_units.Rd man/modify_all_loop_column_names.Rd man/modify_loop_column_names.Rd man/modify_loop_name.Rd man/modules.Rd man/new_indicator.Rd man/ntfp_calories_and_values.Rd man/ntfp_preprocessing.Rd man/ntfp_sold_and_consumed_calculation.Rd man/ntfp_total_individual.Rd man/ntfp_totals.Rd man/pipe.Rd man/plot_dependency_network.Rd man/plot_function_dependency.Rd man/ppi_limits.Rd man/ppi_score.Rd man/ppi_score_card.Rd man/price_per_livestock.Rd man/print_chunk_with_tab_spacing.Rd man/processData.Rd man/prop_or_na.Rd man/proportion_control_per_person.Rd man/proportion_conversions.Rd man/proportions_calculation.Rd man/querywb_stats.Rd man/read_folder_of_csvs.Rd man/read_in_db_dataset.Rd man/register_user.Rd man/remove_extra_central_columns.Rd man/replace_crop_and_livestock_other.Rd man/replace_infinite.Rd man/replace_name_column_with_other.Rd man/replace_unit_column_with_other_single.Rd man/replace_units_with_other_all.Rd man/rhomis_authenticate.Rd man/run_preliminary_calculations.Rd man/sample_raw_data_set.Rd man/save_data_set_to_db.Rd man/save_initial_units.Rd man/save_list_of_df_to_db.Rd man/save_multiple_conversions.Rd man/save_set_of_conversions.Rd man/select_multiple.Rd man/set_project_tag_to_true.Rd man/set_repeat_column_names.Rd man/shorten_individual_column_name.Rd man/shorten_multiple_column_names.Rd man/split_gender_columns.Rd man/split_gender_data.Rd man/split_string_categories_to_dummy.Rd man/submissions_all.Rd man/submit_xml_data.Rd man/swap_livestock_heads_other.Rd man/switch_column_names_and_add_categories_for_specific_project.Rd man/switch_column_names_and_merge_categories.Rd man/switch_units.Rd man/total_and_off_farm_incomes.Rd man/total_crop_income.Rd man/total_livestock_income.Rd man/value_calculations.Rd man/value_gender_fa_calculations.Rd man/value_or_calorie_calculations_item_consumed.Rd man/widen_gender_columns.Rd man/widen_individual_result.Rd man/write_core_values_to_convert_to_file.Rd man/write_docs.Rd man/write_list_of_df_to_folder.Rd man/write_new_collection.Rd man/write_new_values_to_file.Rd man/write_units_to_folder.Rd renv/activate.R tests/testthat.R tests/testthat/setup.R tests/testthat/test-01-extract-units.R tests/testthat/test-02-calculate-prices.R tests/testthat/test-03-calculate-indicators.R tests/testthat/test-CleanColumnNames.R tests/testthat/test-CleanRawData.R tests/testthat/test-CropAndLivestockDiversity.R tests/testthat/test-CropCalculations.R tests/testthat/test-CurrencyConversion.R tests/testthat/test-DataContentsCheck.R tests/testthat/test-DataReformatting.R tests/testthat/test-DietaryDiversity.R tests/testthat/test-ExtractNewValues.R tests/testthat/test-Fertiliser.R tests/testthat/test-FoodSecurity.R tests/testthat/test-GenderControlAll.R tests/testthat/test-HouseholdSize.R tests/testthat/test-LandSize.R tests/testthat/test-LivestockCalculations.R tests/testthat/test-MetaData.R tests/testthat/test-MongoDB.R tests/testthat/test-ProgressOutOfPoverty.R tests/testthat/test-ReformatLoops.R tests/testthat/test-RunAll.R tests/testthat/test-TotalIncomes.R tests/testthat/test-ValueCalculations.R tests/testthat/test-WildFoods.R tests/testthat/test-central-url.com/v1/projects/test-project/forms/test-user/submissions.csv.zip-047e73.R tests/testthat/test-utils-odk-central.R vignettes/access-data.Rmd vignettes/clean-data.Rmd vignettes/getting-started.Rmd