PCRAnalysis: PCR Analysis Tool

In lab-lodato/lodutilities: Utility functions for lab analysis

Description

This functions takes as input the results file from a PCR analysis and gives back an analysis sheet

Usage

PCRAnalysis(inputfile = NA, outputfile = NA, max_rep_diff = 0.8, housekeeping = "GADPH", sheetname = "Analysis")

Arguments

inputfile	Character string of input file, can be left NA (default) and a prompt will ask for file
outputfile	Character string of output file, if left NA (default) sheet is added to input file
max_rep_diff	Maximum range of replicates values
housekeeping	Character string of the housekeeping gene (GADPH as default) against which all deltaCT are calculated
sheetname	Character string of the output sheetname (Analysis as default)

Value

An xlsx sheet with analysis performed (deltaCT and foldchange over housekeeping gene for each sample)

Author(s)

Matteo Miotto

lab-lodato/lodutilities documentation built on Feb. 19, 2022, 2:50 a.m.