nesting_index: Calculate landscape nesting quality index

In land-4-bees/SpeedyBeeModel: Calculates indices of landscape quality for bees

Calculate landscape nesting quality index

Description

Variation of landscape nesting quality index (Lonsdorf et al 2009). Uses FFT convolution to improve runtime.

Usage

nesting_index(
  output_dir,
  landcover_path,
  habitattable_path = NA,
  habitat_table,
  nest_locations,
  forage_range = NA,
  guild_table = NA,
  agg_factor = NA,
  normalize = T,
  useW = F,
  rastertag = NA,
  verbose = T
)

Arguments

output_dir	Path to directory for output files.
landcover_path	Path to land cover raster, including base file name
habitattable_path	Path to habitat quality by land use table (CDL class integers should be in column called 'LULC')
habitat_table	Habitat quality by land use table (instead of habitattable_path)
nest_locations	Nesting types to include. Must match names of habitat table.
forage_range	Foraging range (in m) to use for distance weighting scores surrounding focal cell.
guild_table	Bee community to use to model foraging activity. Includes foraging range and relative abundance of each species. #optional parameters
agg_factor	Aggregation factor for large rasters (use 4 to convert 50m to 120m resolution CDL)
normalize	Normalize values by the number of cells within each moving window?
rastertag	Text string to include in name of output raster
verbose	Include more log messages from model run?

Details

It is necessary to specify 'forage_range' OR 'guild_table,' not both.

land-4-bees/SpeedyBeeModel documentation built on Sept. 27, 2022, 1:17 a.m.