API for langmead-lab/snapcount
R/Bioconductor Package for interfacing with Snaptron for rapid querying of expression counts
| Global functions | |
|---|---|
| .onLoad | Source code |
| Compilation | Man page |
| Coordinates | Man page |
| QueryBuilder | Man page Source code |
| `%<-%` | Source code |
| bool_expressions_to_strings | Source code |
| calc_jir | Source code |
| calc_psi | Source code |
| calculate_coverage_median | Source code |
| choose_non_na | Source code |
| convert_to_sparse_matrix | Source code |
| count_samples | Source code |
| enum | Source code |
| expression_to_string_helper | Source code |
| extract_intervals | Source code |
| extract_samples | Source code |
| extract_strands | Source code |
| finalize_merge | Source code |
| from_url | Man page Source code |
| generate_snaptron_uri | Source code |
| get_col_data | Source code |
| get_column_filters | Man page Source code |
| get_compilation | Man page Source code |
| get_compilation_metadata | Source code |
| get_coordinate_modifier | Man page Source code |
| get_counts | Source code |
| get_regions | Man page Source code |
| get_row_filters | Man page Source code |
| get_row_ranges | Source code |
| get_sids | Man page Source code |
| is.wholenumber | Source code Source code |
| is_chromosome_interval | Source code |
| is_genes_or_intervals | Source code |
| is_hugo_gene | Source code |
| is_list_of_query_builder_groups | Source code |
| is_list_of_query_builders | Source code |
| is_logical_op | Source code |
| is_query_builder | Source code |
| junction_inclusion_ratio | Man page Source code |
| junction_intersection | Man page Source code |
| junction_union | Man page Source code |
| make_verbose | Source code |
| merge_compilations | Source code |
| percent_spliced_in | Man page Source code |
| query_exon | Man page Source code |
| query_gene | Man page Source code |
| query_jx | Man page Source code |
| replace_na | Source code |
| rse | Source code |
| run_queries | Source code |
| run_query | Source code |
| set_column_filters | Man page Source code |
| set_compilation | Man page Source code |
| set_coordinate_modifier | Man page Source code |
| set_regions | Man page Source code |
| set_row_filters | Man page Source code |
| set_sids | Man page Source code |
| shared | Source code |
| shared_sample_count | Source code |
| shared_sample_counts | Man page Source code |
| snapcount | Man page |
| snapcount-package | Man page |
| str_cat | Source code |
| submit_query | Source code |
| tidy_filters | Source code |
| tissue_specificity | Man page Source code |
| tissue_specificity_per_group | Source code |
| uri_of_last_successful_request | Man page Source code |
| validate_range_filters | Source code |
| validate_sample_filter | Source code |
| value_to_snaptron_type | Source code |
