Files in langmead-lab/snapr
R/Bioconductor Package for interfacing with Snaptron for rapid querying of expression counts
.Rbuildignore
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.gitignore
.travis.yml
DESCRIPTION
LICENSE
NAMESPACE
NEWS
R/assertions.R
R/basic_query_functions.R
R/enums.R
R/error_checking.R
R/higher_level_functions.R
R/query_builder.R
R/query_builder_wrappers.R
R/snapcount.R
R/utils.R
R/zzz.R
README.Rmd
README.md
external_tests/README.md
external_tests/all.urls
external_tests/check.sh
external_tests/clean.sh
external_tests/diff_counts.sh
external_tests/make_test_data.R
inst/testdata/test_jir_output.rds
inst/testdata/test_junction_intersection_output.rds
inst/testdata/test_junction_union_output.rds
inst/testdata/test_psi_output.rds
inst/testdata/test_ssc_output.rds
inst/testdata/test_ts_output.rds
man/Compilation.Rd
man/Coordinates.Rd
man/QueryBuilder.Rd
man/from_url.Rd
man/get_column_filters.Rd
man/get_compilation.Rd
man/get_coordinate_modifier.Rd
man/get_regions.Rd
man/get_row_filters.Rd
man/get_sids.Rd
man/junction_inclusion_ratio.Rd
man/junction_intersection.Rd
man/junction_union.Rd
man/percent_spliced_in.Rd
man/query_jx.Rd
man/shared_sample_counts.Rd
man/snapcount-package.Rd
man/tissue_specificity.Rd
man/uri_of_last_successful_request.Rd
tests/test_data_creation/high_level_test_check.R
tests/test_data_creation/high_level_test_creation.R
tests/testthat.R
tests/testthat/test-assertions.R
tests/testthat/test-higher-level-functions.R
tests/testthat/test-query-builder-wrappers.R
tests/testthat/test-query-builder.R
tests/testthat/test-query-functions.R
vignettes/.gitignore
vignettes/snapcount_vignette.Rmd
