tidy_disambiguate_terms: Disambiguate terms

In larmarange/broom.helpers: Helpers for Model Coefficients Tibbles

Disambiguate terms

Description

For mixed models, the term column returned by broom.mixed may have duplicated values for random-effect parameters and random-effect values. In such case, the terms could be disambiguated be prefixing them with the value of the group column. tidy_disambiguate_terms() will not change any term if there is no group column in x. The original term value is kept in a new column original_term.

Usage

tidy_disambiguate_terms(x, sep = ".", model = tidy_get_model(x), quiet = FALSE)

Arguments

x	(data.frame) A tidy tibble as produced by ⁠tidy_*()⁠ functions.
sep	(string) Separator added between group name and term.
model	(a model object, e.g. glm) The corresponding model, if not attached to x.
quiet	(logical) Whether broom.helpers should not return a message when requested output cannot be generated. Default is FALSE.

See Also

Other tidy_helpers: tidy_add_coefficients_type(), tidy_add_contrasts(), tidy_add_estimate_to_reference_rows(), tidy_add_header_rows(), tidy_add_n(), tidy_add_pairwise_contrasts(), tidy_add_reference_rows(), tidy_add_term_labels(), tidy_add_variable_labels(), tidy_attach_model(), tidy_identify_variables(), tidy_plus_plus(), tidy_remove_intercept(), tidy_select_variables()

Examples

if (
  .assert_package("lme4", boolean = TRUE) &&
    .assert_package("broom.mixed", boolean = TRUE) &&
    .assert_package("gtsummary", boolean = TRUE)
) {
  mod <- lme4::lmer(marker ~ stage + (1 | grade) + (death | response), gtsummary::trial)
  mod |>
    tidy_and_attach() |>
    tidy_disambiguate_terms()
}

larmarange/broom.helpers documentation built on Sept. 27, 2024, 12:35 a.m.