Man pages for lasy/alto
Aligns Topics across LDA Models
| align_graph | Alignment between Pairs of Topics |
| alignment-class | Alignment Class Definition |
| align_topics | Align topics from distinct LDA models |
| compute_number_of_paths | Computes the number of paths |
| compute_strain_switching_scores_of_model | *DRAFT* Computes strain switching scores for topic pairs |
| discrepancy | Discrepancy for ordering words in plot_betas |
| dot-check_params | Check validity of arguments arguments to run_lda_models |
| dot-set_lda_seed | Set LDAControl seed |
| kl_div | KL Divergence of Categoricals |
| kl_mat | Pairwise KL divergences |
| models-alignment-method | Extract Models underlying Alignment |
| n_models-alignment-method | Number of Models Method for Alignment Class |
| n_topics-alignment-method | Number of Topics Method for Alignment Class |
| plot_alignment | Visualize alignments between topics of distinct LDA models |
| plot-alignment-missing-method | Plot Method for Alignment Class |
| plot_beta | Plot Topics Heatmap |
| plot_number_of_paths | Plots the number of paths |
| product_weights | Product Weights between a Model Pair |
| remove_summaries | Removes the refinement scores from the last set of models |
| run_lda_models | Run LDA models for specified values of hyper-parameters. |
| setup_edges | Edgelists for Default Alignments |
| show-alignment-method | Show Method for Alignment Class |
| topic_coherence | Computes the coherence score of a topic |
| topic_refinement | Computes the refinement score of a topic |
| topics-alignment-method | Extract List of Topics and their Summaries |
| transport_weights | Transport Weights between Model Pair |
| trim_betas | Filter to words of interest |
| vm_data | Vaginal microbiome data from "Replication and refinement of a... |
| weights-alignment-method | Weights Accessor for Alignment Class |
