Decon_single_sample: Function for single sample weights estimation
In laurapeng/decoderr: Single sample deconvolution for TCGA cancers
Description
Usage
Arguments
Value
View source: R/Decon_single_sample.R
Description
This function allows you to calculate singel sampmle weights
Usage
1
Decon_single_sample(refSet, data, geneIDType)
Arguments
refSet
Label of pre-stored deconvoluted reference dataset
data
Data matrix to be deconvoluted with gene ID as rownames
geneIDType
Choose one among "geneSymbol", "EntrezID" and "TCGA"
Value
A matrix of the estimated sample compartment weights
laurapeng/decoderr documentation built on Dec. 3, 2020, 6:38 a.m.
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Description Usage Arguments Value
View source: R/Decon_single_sample.R
Description
This function allows you to calculate singel sampmle weights
Usage
1 | Decon_single_sample(refSet, data, geneIDType)
|
Arguments
refSet |
Label of pre-stored deconvoluted reference dataset |
data |
Data matrix to be deconvoluted with gene ID as rownames |
geneIDType |
Choose one among "geneSymbol", "EntrezID" and "TCGA" |
Value
A matrix of the estimated sample compartment weights
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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