moran: Moran's Index in TNBC, based on Gabriel neighborhoods
In laurenhsu1/BIRSBIO2020.scProteomics.exploratory: Exploratory analyses of sc proteomics data
Description
Usage
Format
Details
Description
Computed from the Mibi-TOF image data in
"A Structured Tumor-Immune Microenvironment in
Triple Negative Breast Cancer Revealed by
Multiplexed Ion Beam Imaging" (Keren et al., Cell 2018)
Usage
1
Format
csv with 41 patients, 41 Moran's I scores
- p_id
patient ID
- cellSize
Moran's Index for cell size
- Vimentin
Moran's Index for the Vimentin expression
Details
Output of the compute_morans.Rmd script
laurenhsu1/BIRSBIO2020.scProteomics.exploratory documentation built on July 26, 2020, 7:23 a.m.
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Description Usage Format Details
Description
Computed from the Mibi-TOF image data in "A Structured Tumor-Immune Microenvironment in Triple Negative Breast Cancer Revealed by Multiplexed Ion Beam Imaging" (Keren et al., Cell 2018)
Usage
1 |
Format
csv with 41 patients, 41 Moran's I scores
- p_id
patient ID
- cellSize
Moran's Index for cell size
- Vimentin
Moran's Index for the Vimentin expression
Details
Output of the compute_morans.Rmd script
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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