rebuild: Get priors for biomass dynamic assessment from an 'FLBRP'...

In laurieKell/FLCandy: Candidate methods for FLR

Get priors for biomass dynamic assessment from an FLBRP object

Description

Projects rebuilding trajectories from different initial SSB levels

Usage

rebuild(
  object,
  targetF = NULL,
  targetSSB = NULL,
  nInitial = 100,
  growthRate = 0.25,
  minVal = 0.000001,
  maxVal = 1,
  burnin = 20,
  truncate = TRUE
)

## S4 method for signature 'FLBRP'
rebuild(
  object,
  targetF = computeRefpts(object)["msy", "harvest"] * 0,
  targetSSB = computeRefpts(object)["msy", "ssb"],
  nInitial = 100,
  growthRate = 0.25,
  minVal = 0.000001,
  maxVal = 1,
  burnin = 20,
  truncate = TRUE
)

Arguments

object	An object representing the population
targetF	Target fishing mortality during rebuilding
targetSSB	Target spawning stock biomass
nInitial	Number of initial SSB levels
growthRate	Growth rate for depletion sequence
minVal	Minimum depletion value
maxVal	Maximum depletion value
burnin	Number of years for burn-in period
truncate	Whether to remove burn-in period

Value

priors attribute as an FLPar of the FLBRP object

An object with rebuilding trajectories

Examples

## Not run: 
  eql=FLBRP(...)  # Create or load an FLBRP object
  priors(eql)

## End(Not run)
Rebuild a fish population

laurieKell/FLCandy documentation built on April 17, 2025, 5:23 p.m.