exp-findPatterns-yw: Find Patterns
In lawremi/exploRase: GUI for exploratory data analysis of systems biology data
Description
Usage
Arguments
Value
Author(s)
Description
Finds patterns in data. Transitions within range of 'fraction' (centered on median)
are considered flat (unchanging). Those below are falling and those above are rising.
Usage
1
exp_findPatterns(data, flat_fraction)
Arguments
data
A data frame of experimental data according to exploRase conventions.
flat_fraction
The fraction of transitions considered unchanged, centered on median.
Value
a data frame, with a row for each gene. The first column is the sum of
x^i over all i from 1 to ncol(data)-1, where
x is 1, 2, or 3, depending on whether the pattern is up, same, or down,
respectively, for transition i.
The second column contains the magnitude of the pattern.
Author(s)
Michael Lawrence <mflawren@fhcrc.org>
lawremi/exploRase documentation built on May 20, 2019, 2:40 p.m.
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Description Usage Arguments Value Author(s)
Description
Finds patterns in data. Transitions within range of 'fraction' (centered on median) are considered flat (unchanging). Those below are falling and those above are rising.
Usage
1 | exp_findPatterns(data, flat_fraction)
|
Arguments
data |
A data frame of experimental data according to exploRase conventions. |
flat_fraction |
The fraction of transitions considered unchanged, centered on median. |
Value
a data frame, with a row for each gene. The first column is the sum of
x^i over all i from 1 to ncol(data)-1, where
x is 1, 2, or 3, depending on whether the pattern is up, same, or down,
respectively, for transition i.
The second column contains the magnitude of the pattern.
Author(s)
Michael Lawrence <mflawren@fhcrc.org>
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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