semivariogram: Empirical Semivariogram

In lbaole17/krige.ext: Geospatial Kriging with Metropolis Sampling (Experimental Version)

Description

This function computes the empirical semivariance for a spatially-distributed variable. Based on the user's chosen level of coarsening, the semivariance is presented for various distances.

Usage

semivariogram(x,east,north,bins=13,draw.plot=TRUE)
     

Arguments

x	The spatial variable for which the semivariogram is desired.
east	Vector of eastings for the observations of x.
north	Vector of northings for the observations of x.
bins	Number of bins into which distances should be divided. The observed distances will be split at equal intervals, and the semivariance will be computed within each interval. Defaults to 13 intervals.
draw.plot	By default, a graph of the empirical semivariogram appears with a run of the function. Changing this setting to FALSE omits this and only returns semivariogram values.

Details

Semivariance is equal to half of the variance of the difference in a variable's values at a given distance. That is, the semivariance is defined as: γ(h)=0.5*E[X(s+h)-X(s)]^2, where X is the variable of interest, s is a location, and h is the distance from s to another location.

An empirical semivariogram is a good tool for diagnosing the kind of spatial relationship that can best describe the data. With a view of the empirical semivariogram, a user can consult images of parametric semivariograms to determine whether an exponential, Gaussian, or other powered expoential function fit the data well, or if another style of semivariogram works better. Examining this also allows the user to develop priors such as the approximate split in variance between the nugget and partial sill as well as the approximate distance of the effective range. Semivariograms are explicitly tied to a corresponding spatial correlation function, so determining the former automatically implies the latter. See Banerjee, Carlin, and Gelfand for a fuller explanation, as well as a guidebook to semivariogram diagnosis (2015, 26-30).

Value

Returns an object of class numeric with each bin's value of the semivariance. Each entry is labeled by the upper bound of the bin. The lower bound of each bin is 0 for the first one, and the prior upper bound for all subsequent bins.

References

Sudipto Banerjee, Bradley P. Carlin, and Alan E. Gelfand. 2015. Hierarchical Modeling and Analysis for Spatial Data. 2nd ed. Boca Raton, FL: CRC Press.

Examples

#Examine Data
summary(ContrivedData)

#Initial OLS Model
contrived.ols<-lm(y~x.1+x.2,data=ContrivedData);summary(contrived.ols)

#Graphically Examine the Semivariogram of Raw Data and Residuals
raw.semivar<-semivariogram(x=ContrivedData$y,east=ContrivedData$s.1,
     north=ContrivedData$s.2)
resid.semivar<-semivariogram(x=contrived.ols$residuals,east=ContrivedData$s.1,
     north=ContrivedData$s.2,draw.plot=FALSE)
points(resid.semivar,pch=3,col='blue')

lbaole17/krige.ext documentation built on Sept. 29, 2020, 1:52 a.m.