.github/ISSUE_TEMPLATE/issue_template.md

In lcolladotor/biocthis: Automate package and project setup for Bioconductor packages

name: Bug Report about: Describe the bug in detail title: "[BUG] A short description of the bug" labels: '' assignees: ''

Please ask questions about how to use biocthis on the Bioconductor Support Site using the appropriate tag(s) including the one for this package.

Note. Update the issue title to concisely describe the bug.

Describe the bug

Please provide a clear and concise description of what the bug is.

Provide a minimally reproducible example (reprex)

Provide a clear and concise description of the bug. It can be easily (but not necessarily) illustrated with a minimally reproducible example using the reprex package.

For tips on creating a reprex, see this StackOverflow link.

Expected behavior

A clear and concise description of what you expected to happen.

R Session Information

Please report the output of either sessionInfo() or sessioninfo::session_info() here.

options(width = 120)
## insert session info here
# sessioninfo::session_info() ## provides GitHub, pandoc, and other details
# sessionInfo() ## base R function in case you don't want to install sessioninfo

Indicate whether BiocManager::valid() returns TRUE.

• [ ] BiocManager::valid() is TRUE

Note. To avoid potential issues with version mixing and reproducibility, do not install packages from GitHub.

Additional Context

Provide some additional context for the bug report. You may include web links (e.g., from GitHub) to:

• raw code
• a commit
• code inside a commit
• code from an R package

Is the package installed via bioconda?

We find that bioconda installations can often be problematic due to the nature of the setup environment and potential for version mixing.

The preferred method for installing Bioconductor software through BiocManager and we do not support issues related to bioconda installations at this time.

lcolladotor/biocthis documentation built on Jan. 17, 2024, 8:07 p.m.