Files in leekgroup/recount
Explore and download data from the recount project

.Rbuildignore
.github/.gitignore
.github/CODE_OF_CONDUCT.md .github/CONTRIBUTING.md .github/ISSUE_TEMPLATE/feature_request_template.md .github/ISSUE_TEMPLATE/issue_template.md .github/SUPPORT.md
.github/workflows/check-bioc.yml
.gitignore
DESCRIPTION
NAMESPACE
NEWS.md R/abstract_search.R R/add_metadata.R R/add_predictions.R R/all_metadata.R R/browse_study.R R/coverage_matrix.R R/download_retry.R R/download_study.R R/expressed_regions.R R/find_geo.R R/geo_characteristics.R R/geo_info.R R/getRPKM.R R/getTPM.R R/read_counts.R R/recount-package.R R/recount_abstract-data.R R/recount_exons-data.R R/recount_genes-data.R R/recount_url-data.R R/reproduce_ranges.R R/rse_gene_SRP009615-data.R R/scale_counts.R R/snaptron_query.R R/utils.R README.Rmd README.md
_pkgdown.yml
codecov.yml
data/recount_abstract.RData
data/recount_exons.RData
data/recount_genes.RData
data/recount_url.RData
data/rse_gene_SRP009615.RData
dev/01_create_pkg.R dev/02_git_github_setup.R dev/03_core_files.R dev/04_update.R
inst/CITATION
man/abstract_search.Rd man/add_metadata.Rd man/add_predictions.Rd man/all_metadata.Rd man/browse_study.Rd man/coverage_matrix.Rd man/download_retry.Rd man/download_study.Rd man/expressed_regions.Rd
man/figures/logo.png
man/find_geo.Rd man/geo_characteristics.Rd man/geo_info.Rd man/getRPKM.Rd man/getTPM.Rd man/read_counts.Rd man/recount-package.Rd man/recount_abstract.Rd man/recount_exons.Rd man/recount_genes.Rd man/recount_url.Rd man/reproduce_ranges.Rd man/rse_gene_SRP009615.Rd man/scale_counts.Rd man/snaptron_query.Rd
pkgdown/extra.css
recount.Rproj
tests/test-all.R tests/testthat/test-annotation.R tests/testthat/test-data.R tests/testthat/test-download_retry.R tests/testthat/test-misc.R tests/testthat/test-web-metadata.R
vignettes/.gitignore
vignettes/Makefile
vignettes/fakeVignettes/SRP009615-results.Rmd vignettes/recount-quickstart.Rmd
leekgroup/recount documentation built on May 24, 2024, 11:19 a.m.