README.md

In leipzig/flowFramePlus: Provenance wrappers for flowFrame and flowSet

How to dockerize flowFramePlus

devtools::build()

This will produce a .tar.gz in the directory above the package directory

cd ..
ln -s flowFramePlus/Dockerfile .
aws ecr get-login --no-include-email --region us-east-1
# run that
docker build -t cytovas-ffp .
docker tag cytovas-ffp:latest 205853417430.dkr.ecr.us-east-1.amazonaws.com/cytovas-ffp:latest
docker push 205853417430.dkr.ecr.us-east-1.amazonaws.com/cytovas-ffp:latest

To run from Amazon ECR

aws ecr get-login --no-include-email --region us-east-1

(run this login command)

To add local mounts to docker ()

docker run -it -v /projects:/projects 205853417430.dkr.ecr.us-east-1.amazonaws.com/cytovas-ffp /usr/local/lib/R/bin/R 

You can then

library("flowFramePlus")

leipzig/flowFramePlus documentation built on May 28, 2019, 5:40 a.m.