get_loc_fdr_pval: get_loc_fdr_pval

View source: R/get_loc_fdr_pval.R

get_loc_fdr_pvalR Documentation

get_loc_fdr_pval

Description

get_loc_fdr_pval

Usage

get_loc_fdr_pval(
  mat,
  cases,
  controls,
  stat_test,
  fdr = 0.1,
  resolution = 100,
  return_table = TRUE
)

Arguments

mat

matrix with samples on columns and locs on rows

cases

case column names

controls

control column names

stat_test

statistical test used for signifance estimation

fdr

false discover rate desired

resolution

number of bins to use for table

return_table

if set to TRUE returns table of FDR values instead of single value

Value

dmrscaler returns a list of dmrs at each layer


leroybondhus/dmrscaler documentation built on July 11, 2022, 4:56 a.m.