getClustersimilarity: get clusters similarity function This function recieves a...
In levitesm/msms.spectra.clusters.R: MSMS Spectra clustering and spectral libraries creation.
Description
Usage
Arguments
Examples
Description
get clusters similarity function
This function recieves a spectral library and returns a data.table of clusters pairs who's representative spectra are similar to each other.
Usage
1
getClustersimilarity(library, N = 1000, COR = 50, SIZE = 5)
Arguments
library
A spectral library
N
Number of similar cluster pairs that need to be found. Defaults to 1000.
COR
A minimal correlation between cluster representatives needed. Defaults to 50.
SIZE
A minimal size of clusters considered. Defaults to 5.
Examples
1
corr_dt<-getClustersimilarity(lib1)
levitesm/msms.spectra.clusters.R documentation built on May 4, 2019, 4:13 a.m.
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Description Usage Arguments Examples
Description
get clusters similarity function This function recieves a spectral library and returns a data.table of clusters pairs who's representative spectra are similar to each other.
Usage
1 | getClustersimilarity(library, N = 1000, COR = 50, SIZE = 5)
|
Arguments
library |
A spectral library |
N |
Number of similar cluster pairs that need to be found. Defaults to 1000. |
COR |
A minimal correlation between cluster representatives needed. Defaults to 50. |
SIZE |
A minimal size of clusters considered. Defaults to 5. |
Examples
1 | corr_dt<-getClustersimilarity(lib1)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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