naplot: Overview of missing value

In lgatto/MSnbase: Base Functions and Classes for Mass Spectrometry and Proteomics

Overview of missing value

Description

Visualise missing values as a heatmap and barplots along the samples and features.

Usage

naplot(
  object,
  verbose = isMSnbaseVerbose(),
  reorderRows = TRUE,
  reorderColumns = TRUE,
  ...
)

Arguments

object	An object of class MSnSet.
verbose	If verbose (default is isMSnbaseVerbose()), print a table of missing values.
reorderRows	If reorderRows (default is TRUE) rows are ordered by number of NA.
reorderColumns	If reorderColumns (default is TRUE) columns are ordered by number of NA.
...	Additional parameters passed to image2.

Value

Used for its side effect. Invisibly returns NULL

Author(s)

Laurent Gatto

Examples

data(naset)
naplot(naset)

lgatto/MSnbase documentation built on Nov. 12, 2024, 10:58 a.m.