p53.stat: p53 Mutation Status

In lgeistlinger/safe: Significance Analysis of Function and Expression

p53 Mutation Status

Description

This data set is included for use in the vignette and provides the p53 mutation status (p53+ = 1 and p53- = 0) for each of 251 samples in the Miller et al. breast cancer study data.

Usage

data(p53.stat)

Format

A data.frame with 2 columns, "samplename" and "p53", and 251 rows.

Source

NCBI's Gene Expression Omnibus, accession GSE3494

References

Miller, L.D., Smeds, J., George, J., Vega, V.B., Vergara, L., Ploner, A., Pawitan, Y.,Hall, P., Klaar, S., Liu, E.T., and Bergh, J. (2005) ‘An expression signature for p53status in human breast cancer predicts mutation status, transcriptional effects, and patient survival’, Proc Natl Acad Sci U S A, 102(38), 13550-13555.

lgeistlinger/safe documentation built on Aug. 4, 2023, 7:34 p.m.