Files in lhjohn/EmcDementiaPredictionBase
A Skeleton for Prediction Development Studies that use the PatientLevelPrediction Framework

.Rbuildignore
.Rprofile
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DESCRIPTION
EmcDementiaPredictionBase.Rproj
EmcDementiaPredictionBaseResults/log.txt
HydraConfig.json
NAMESPACE
NEWS.md R/BackwardsComp.R R/CreateAllCohorts.R R/EmcDementiaPredictionBase.R R/Helpers.R R/Main.R R/PackageResults.R R/SubmitResults.R R/createProtocol.R R/createValidationPackageJson.R STUDY-PACKAGE-BUILD.md STUDY-PACKAGE-EXECUTE.md STUDY-PACKAGE-SETUP-NORENV.md STUDY-PACKAGE-SETUP.md STUDY-PACKAGE-SHARE.md
_pkgdown.yml
docs/404.html
docs/articles/AddingCohortCovariates.html
docs/articles/UsingSkeletonPackage.html
docs/articles/index.html
docs/authors.html
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/link.svg
docs/news/index.html
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/readme.html
docs/reference/SkeletonPredictionStudy.html
docs/reference/createCohorts.html
docs/reference/createJournalDocument.html
docs/reference/createMultiPlpReport.html
docs/reference/createPlpProtocol.html
docs/reference/execute.html
docs/reference/getCohortCovariateData.html
docs/reference/index.html
docs/reference/packageResults.html
docs/reference/populateShinyApp.html
docs/reference/submitResults.html
errorReportSql.txt
extras/CodeToRun.R extras/PackageMaintenance.R extras/createDevelopmentPackageExample.R extras/createDevelopmentPackageFunctions.R extras/createLockfiles.R extras/packageDeps.R extras/updateSkeleton.R extras/updateSkeletonHelper.R
inst/Cohorts.csv
inst/cohorts/5080.json
inst/cohorts/5920.json
inst/cohorts/COVID_ID134_V1_Persons_hospitalized_with_COVID19.json
inst/cohorts/COVID_ID164_V1_Death.json
inst/doc/UsingSkeletonPackage.pdf inst/protocol/main.Rmd inst/protocol/model-design.Rmd inst/protocol/plp-analysis.Rmd inst/protocol/plp-diagnostic.Rmd inst/protocol/plp-evaluation.Rmd inst/protocol/plp-introduction.Rmd inst/protocol/plp-outcome.Rmd inst/protocol/plp-participants.Rmd inst/protocol/plp-predictors.Rmd
inst/settings/predictionAnalysisList.json
inst/settings/predictionAnalysisList_old.json
inst/sql/sql_server/5080.sql
inst/sql/sql_server/5920.sql
inst/sql/sql_server/COVID_ID134_V1_Persons_hospitalized_with_COVID19.sql
inst/sql/sql_server/COVID_ID164_V1_Death.sql
man/EmcDementiaPredictionBase.Rd man/createPlpProtocol.Rd man/execute.Rd man/packageResults.Rd man/submitResults.Rd
pyEnvironment.yml
readme.md readmeSharing.md
renv.lock
tests/testthat/test-CohortCovariateCode.R tests/testthat/test-createDocument.R vignettes/CreatingStudyPackageInR.Rmd
vignettes/Figure1.png
vignettes/UsingSkeletonPackage.Rmd
lhjohn/EmcDementiaPredictionBase documentation built on March 25, 2022, 12:22 a.m.