data1: Sample Data for sptBClstRds Function

In limin321/spamut: Visualizing Somatic Alterations of 10X Spatial Transcriptomics Data

Sample Data for sptBClstRds Function

Description

Second input for sptBClstRds

Usage

data1

Format

A data frame with 36601 rows and 11 variables

## document each column/variable; no "" is needed for the variable name, otherwise it will cause warning.

X

the first colum is the gene name

AAACAAGTATCTCCCA.1

spatial barcode of spot1

AGATACTCAAGATCGA.1

spatial barcode of spot2

AGATCTCAGGTGTGAT.1

spatial barcode of spot3

AGATGACTCGCCCACG.1

spatial barcode of spot4

AGCAACATATCTTATT.1

spatial barcode of spot5

CAGAACTTAGCCCTCT.1

spatial barcode of spot6

CCGTAGGGTTGTTTAC.1

spatial barcode of spot7

CCTCCTGTTGTGTCGT.1

spatial barcode of spot8

TGATGTCAATTAAGTG.1

spatial barcode of spot9

TTACACGATCTGCGAC.1

spatial barcode of spot10

limin321/spamut documentation built on May 13, 2022, 12:50 a.m.