Man pages for lin-lab/CEPSKAT
Finding rare variant associations for extreme phenotype samples.
| CEPSKAT-package | SNP-set (Sequence) Kernel Association Test for Continuous... |
| CEP_Theoretical_Power | Theoretical Power Calculation for CEP-SKAT |
| Get_Betas | Get effect sizes for causal variants |
| Get_W_Beta_Dist | Obtain beta weights |
| Make_All_Minor_Alleles | Make genotype matrix have MAF<0.5 |
| Sample_Haplotypes | Choose random block of haplotypes for theoretical power |
| SKAT_Get_TruncatedNormal | Get Truncated Normal MLEs |
| SKAT_Null_Model_CEP | Fit the Null model for CEP-SKAT |
| SKAT_TruncatedNormalCEP_Get_Moment | Get moments of Truncated Normal Distribution |
| SKAT_TruncatedNormalCEPSolve | Solve score equations for truncated normal |
