plot_pls_scores: PLS-DA scores plot

In lisaschneider0509/lipidomeComparisonR:

Description

'plot_pls_scores' plots the loadings between the first two principal components.

Usage

plot_pls_scores(
  pls_da_obj,
  colour = TRUE,
  top_loadings = 10,
  title = "PLS-DA",
  xlab = "PLS-DA 1",
  ylab = "PLS-DA 2"
)

Arguments

pls_da_obj	Object produced by MixOmics::splsda or MixOmics::plsda.
colour	logical. TRUE ... color scale by PC1. FALSE (default) ... all black.
top_loadings	integer. Number of loadings to label (the top n loadings of both PCs are labelled).
title	string. Main title of the plot. Default = "PLS-DA"
xlab	string. Title of x-axis. Default: "PLS-DA 1"
ylab	string. Title of y-axis. Default: "PLS-DA 2"

lisaschneider0509/lipidomeComparisonR documentation built on Aug. 12, 2020, 12:52 a.m.