ge_cgh_locIGR: Data from GE CGH and location

In llrs/inteRmodel: Find Models of Interaction

Data from GE CGH and location

Description

This data set contains a list of 3 dataframe. On dataframe for GE, CGH and localization. This dat is the 2nd version of segmentation. Misclassified patients were excluded and segmentation was re-run excluding those patients (done july 2012 - C Philippe)

Usage

data(ge_cgh_locIGR)

Format

one instance, 1 row per patient

Note

This data is copied from the gliomaData package at http://biodev.cea.fr/sgcca/

Author(s)

V Frouin, 2012-07-31

Source

IGR, Villejuif, France

Examples

#read data
data(ge_cgh_locIGR)
names(ge_cgh_locIGR)
names(ge_cgh_locIGR$multiblocks)
class(ge_cgh_locIGR$multiblocks$GE)
class(ge_cgh_locIGR$multiblocks$CGH)
class(ge_cgh_locIGR$multiblocks$y)
head(ge_cgh_locIGR$multiblocks$y)
class(ge_cgh_locIGR$ylabel)
# See difference between multiblock_y (a dummy variable matrix)
# and ylabel a vector of labels (1, 2, 3)
head(ge_cgh_locIGR$ylabel,10)
head(ge_cgh_locIGR$multiblocks$y,10)

llrs/inteRmodel documentation built on April 1, 2022, 4:04 p.m.