biological_relationships: Performs the calculation of biological information
In llrs/integration-helper: Facilitate the integration
View source: R/biological_relationship.R
Description
Looks if the score is really associated in the permutations
Does the ORA enrichment and fgsea analysis on the genes
Usage
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biological_relationships(
sgcca.centroid,
STAB,
label,
otus_tax,
epithelium,
today
)
Arguments
sgcca.centroid
SGCCA output
STAB
Output of bootstrap by boot_sgcca function.
label
Name of the output files
otus_tax
matrix as output of taxonomy function
epithelium
Data from a file from the lab
today
Date as in character format
llrs/integration-helper documentation built on Sept. 24, 2021, 10:57 a.m.
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View source: R/biological_relationship.R
Description
Looks if the score is really associated in the permutations Does the ORA enrichment and fgsea analysis on the genes
Usage
1 2 3 4 5 6 7 8 | biological_relationships(
sgcca.centroid,
STAB,
label,
otus_tax,
epithelium,
today
)
|
Arguments
sgcca.centroid |
SGCCA output |
STAB |
Output of bootstrap by |
label |
Name of the output files |
otus_tax |
matrix as output of |
epithelium |
Data from a file from the lab |
today |
Date as in character format |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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