lmc297/bactaxR: Bacterial taxonomy construction and evaluation in R

Functions for plotting and interpreting ANI values, constructing dendrograms using pairwise ANI values, identifying medoid genomes at selected genomospecies thresholds, and mapping discrete traits to phylogenies.

Getting started

Package details

AuthorLaura M. Carroll
MaintainerLaura M. Carroll <laura.carroll@umu.se>
LicenseGNU General Public License v3.0
Version0.2.3
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("lmc297/bactaxR")
lmc297/bactaxR documentation built on Feb. 6, 2024, 7:41 p.m.