# # # # Canonical code to setup the weird parameter passing
# #
# # This code needs to be pasted at the top of most of the methods in this
# # package. There should be a better way.
# #
# # It allows for unquoted naming of variables in the method calls.
# if ( FALSE ) {
# # This code block takes the parameters of
# # Yobs, Z, B, siteID = NULL, data=NULL, ...
# # and makes a dataframe with canonical Yobs, Z, B, and siteID columns.
# if(!is.null(data)){
# if ( missing( "Yobs" ) ) {
# data = data.frame( Yobs = data[[1]],
# Z = data[[2]],
# B = data[[3]] )
# n.tx.lvls = length( unique( data$Z ) )
# stopifnot( n.tx.lvls == 2 )
# stopifnot( is.numeric( data$Yobs ) )
# } else {
# if ( !is.null( siteID ) ) {
# siteID = data[[siteID]]
# stopifnot( !is.null( siteID ) )
# }
# data = data.frame( Yobs = eval( substitute( Yobs ), data ),
# Z = eval( substitute( Z ), data ),
# B = eval( substitute( B ), data) )
# data$siteID = siteID
# }
# } else {
# data = data.frame( Yobs = Yobs,
# Z = Z,
# B = B )
# if ( !is.null( siteID ) ) {
# data$siteID = siteID
# }
# }
# #
# # To just make the variables as vectors
# #
# if(!is.null(data)){
# if ( missing( "Yobs" ) ) {
# Yobs<-data[,1]
# Z<-data[,2]
# B<-data[,3]
# } else {
# Yobs = eval( substitute( Yobs ), data )
# Z = eval( substitute( Z ), data )
# B = eval( substitute( B ), data)
# }
# } else {
# if ( is.data.frame(Yobs) ) {
# stopifnot( is.null( data ) )
# B = Yobs$B
# Z = Yobs$Z
# Yobs = Yobs$Yobs
# }
# }
# #
# # To make a dataframe with canonical variable names
# #
# if( !is.null(data) ){
# if ( missing( "Yobs" ) ) {
# data = data.frame( Yobs = data[[1]],
# Z = data[[2]],
# B = data[[3]] )
# } else {
# d2 = data
# if ( !is.null( siteID ) ) {
# d2$siteID = data[[siteID]]
# stopifnot( !is.null( d2$siteID ) )
# }
# d2$Yobs = eval( substitute( Yobs ), data )
# d2$Z = eval( substitute( Z ), data )
# d2$B = eval( substitute( B ), data )
# data = d2
# rm( d2 )
# }
# } else {
# data = data.frame( Yobs = Yobs,
# Z = Z,
# B = B )
# if ( !is.null( siteID ) ) {
# data$siteID = siteID
# }
# }
# stopifnot( length( unique( data$Z ) ) == 2 )
# stopifnot( is.numeric( data$Yobs ) )
# #
# # Checks on dataframe integrity
# #
# stopifnot( length( unique( data$Z ) ) == 2 )
# stopifnot( is.numeric( data$Yobs ) )
# if ( !missing( siteID ) ) {
# data = data.frame( Yobs = eval( substitute( Yobs ), data ),
# Z = eval( substitute( Z ), data ),
# B = eval( substitute( B ), data),
# siteID = eval( substitute( siteID ), data ) )
# } else {
# data = data.frame( Yobs = eval( substitute( Yobs ), data ),
# Z = eval( substitute( Z ), data ),
# B = eval( substitute( B ), data) )
# }
# }
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