lmweber/ggspavis: Visualization functions for spatially resolved transcriptomics data

Visualization functions for spatially resolved transcriptomics datasets stored in SpatialExperiment format. Includes functions to create several types of plots for data from from spot-based (e.g. 10x Genomics Visium) and molecule-based (e.g. seqFISH) technological platforms.

Getting started

Package details

Bioconductor views SingleCell Spatial Transcriptomics
Maintainer
LicenseMIT + file LICENSE
Version1.1.7
URL https://github.com/lmweber/ggspavis
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("lmweber/ggspavis")
lmweber/ggspavis documentation built on March 30, 2022, 12:44 p.m.