lmweber/ggspavis: Visualization functions for spatial transcriptomics data
Visualization functions for spatial transcriptomics data. Includes functions to generate several types of plots, including spot plots, feature (molecule) plots, reduced dimension plots, spot-level quality control (QC) plots, and feature-level QC plots, for datasets from the 10x Genomics Visium and other technological platforms. Datasets are assumed to be in either SpatialExperiment or SingleCellExperiment format.
Getting started
Browse package contents
Package details |
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| Bioconductor views | DimensionReduction GeneExpression QualityControl SingleCell Spatial Transcriptomics |
| Maintainer | |
| License | MIT + file LICENSE |
| Version | 1.9.10 |
| URL | https://github.com/lmweber/ggspavis |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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