API for lmweber/regsplice
L1-regularization based methods for detection of differential splicing
| Global functions | |
|---|---|
| .fitFullSingle | Source code |
| .fitNullSingle | Source code |
| .fitRegSingle | Source code |
| .removeSingleExonGenes | Source code |
| LRTests | Man page Source code |
| LR_stats | Man page |
| LR_stats,RegspliceResults-method | Man page |
| RegspliceData | Man page Source code |
| RegspliceData-class | Man page |
| RegspliceResults | Man page Source code |
| RegspliceResults-class | Man page |
| [,RegspliceData,ANY,ANY,ANY-method | Man page |
| assays,RegspliceData-method | Man page |
| colData,RegspliceData-method | Man page |
| countsData | Man page |
| countsData,RegspliceData-method | Man page |
| createDesignMatrix | Man page Source code |
| df_tests | Man page |
| df_tests,RegspliceResults-method | Man page |
| filterLowCounts | Man page Source code |
| filterZeros | Man page Source code |
| fitFullMultiple | Man page Source code |
| fitNullMultiple | Man page Source code |
| fitRegMultiple | Man page Source code |
| gene_IDs | Man page |
| gene_IDs,RegspliceResults-method | Man page |
| initializeResults | Man page Source code |
| p_adj | Man page |
| p_adj,RegspliceResults-method | Man page |
| p_vals | Man page |
| p_vals,RegspliceResults-method | Man page |
| regsplice | Man page Source code |
| rowData,RegspliceData-method | Man page |
| runNormalization | Man page Source code |
| runVoom | Man page Source code |
| summaryTable | Man page Source code |
| weightsData | Man page |
| weightsData,RegspliceData-method | Man page |
