lmyint/rsemmed: An interface to the Semantic MEDLINE database

A programmatic interface to the Semantic MEDLINE database. It provides functions for searching the database for concepts and finding paths between concepts. Path searching can also be tailored to user specifications, such as placing restrictions on concept types and the type of link between concepts. It also provides functions for summarizing and visualizing those paths.

Getting started

Package details

Bioconductor views Annotation Pathways Software SystemsBiology
URL https://github.com/lmyint/rsemmed
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
lmyint/rsemmed documentation built on Sept. 13, 2020, 11:04 p.m.