recreate.kproject: recreate kproject

In lptolik/R4Kappa: Kappa simulation Project

Description

Function creates clone of existing project with modification according to values of arguments. NA values will be kept the same as original project

Usage

recreate.kproject(project, name = NA, constantfiles = NA, templatefiles = NA, 
    paramfile = NA, exec.path = NA, shFile = NA, jobFile = NA, 
    jobCFile = NA, repReg = NA, type = project$type)

Arguments

project	original project to be used as template
name	name for the new project
constantfiles	list of file names containing constant part of the model
templatefiles	list of template file names to be used to create model
paramfile	list of names for parameter file to be generated
exec.path	path to kappa language simulator executables in simulation environment
shFile	run script template file name
jobFile	job management job file template
jobCFile	job management job template file for concurrent simulations
repReg	regular expression to be replaced with number of parameter set
type	type of the project,c('parallel','concurrent','both')

Note

The main reason to have “recreate” method is to have an ability to compare behaviour of various model setups. During the process of “recreation” the only part of the project that is never change is kproject$paramSet. So updated model will be executed with the same set of parameter values make an appropriate comparisons.

Author(s)

Anatoly Sorokin

lptolik/R4Kappa documentation built on May 21, 2019, 7:51 a.m.