Description Usage Arguments Note Author(s)
Function creates clone of existing project with modification according to values of arguments. NA values will be kept the same as original project
1 2 3 |
project |
original project to be used as template |
name |
name for the new project |
constantfiles |
list of file names containing constant part of the model |
templatefiles |
list of template file names to be used to create model |
paramfile |
list of names for parameter file to be generated |
exec.path |
path to kappa language simulator executables in simulation environment |
shFile |
run script template file name |
jobFile |
job management job file template |
jobCFile |
job management job template file for concurrent simulations |
repReg |
regular expression to be replaced with number of parameter set |
type |
type of the project,c('parallel','concurrent','both') |
The main reason to have “recreate” method is to have an ability to compare behaviour of various model setups. During the process of “recreation” the only part of the project that is never change is kproject$paramSet
. So updated model will be executed with the same set of parameter values make an appropriate comparisons.
Anatoly Sorokin
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