getB.fun: getB.fun

In lschen-stat/SNPath: Algorithms for pathway analysis using SNP data

Description

TBD

Usage

getB.fun(gseaLis, y0=NULL, weights0=NULL, lambda=NULL, nmsiz=100, intercept=TRUE, 
         eq.eSNP=TRUE,tol=0.001,maxiter=100, method="AIC", 
         return.lambda=TRUE)

Arguments

gseaLis
y0	If non-null, use y0 for disease status.
weights0
lambda	If null, compute lambda using find.lambda
nmsiz	maximum number of genes used at a time
intercept	passed to find.lambda, and logistic.ridge.c
eq.eSNP	passed to find.lambda, and logistic.ridge.c
tol	passed to find.lambda, and logistic.ridge.c
maxiter	passed to find.lambda, and logistic.ridge.c
method	passed to find.lambda
return.lambda	if true, returns list containing beta vector and lambda vector

Details

If needed, split the X matrix of characteristic vectors

Value

Returns beta list or list containing beta list and lambda value if return.lambda is true.

Note

TBD

References

TBD

See Also

TBD

Examples

  #TBD

lschen-stat/SNPath documentation built on May 30, 2019, 7:14 p.m.