View source: R/fitPhyloNetwork.R

This function returns the likelihood

1 | ```
fitPhyloNetwork(phy, network, pars)
``` |

`phy` |
An object of class 'phylo' |

`network` |
A network, specified by an n x n matrix filled with 0s and 1s |

`pars` |
Model parameters: q01, q10, pSpec |

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