plot.sgsOut: Plot spatial autocorrelation graph

In lukembrowne/sgsR: Spatial genetic structure analyses in R

Description

Plots a spatial autocorrelation graph with Kinship estimator on y axis and distance on x axis. Each point represents the average kinship estimate within that distance interval. Dashed lines represent 95

Usage

## S3 method for class 'sgsOut'
plot(x, overlay = FALSE, max_distance = NULL,
  lwd_avg = 2, col_avg = "black", pch = 19, lwd_CI = 1, lty_CI = 4,
  col_CI = "black", ylab = "Kinship", xlab = "Distance", ...)

Arguments

x	An sgsOut objects that contains results of an sgs analysis
overlay	If TRUE, overlay plot on current plot.
max_distance	Maximum distance to display on x axis. If NULL, defaults to value of largest distance interval
lwd_avg	Line width of line connecting kinship estimates in each distance interval
col_avg	Color of points and line connecting kinship estimates in each distance interval
pch	Point type for average value of kinsihp estimates in each distance interval
lwd_CI	Line width of confidence interval lines
lty_CI	Line type of confidence interval lines
col_CI	Color of confidence interval lines
ylab	Y axis label
xlab	X axis label
...	Arguments to pass to generic plotting functions

Value

A spatial autocorrelation plot

Examples

1

lukembrowne/sgsR documentation built on May 21, 2019, 8:58 a.m.