API for lunacab/STATegRa
Classes and methods for multi-omics data integration
| Global functions | |
|---|---|
| Block1 | Man page |
| Block1.PCA | Man page |
| Block2 | Man page |
| Block2.PCA | Man page |
| STATegRa | Man page |
| STATegRa-defunct | Man page |
| STATegRa-package | Man page Man page |
| STATegRaUsersGuide | Man page Source code |
| STATegRa_data | Man page |
| STATegRa_data_TCGA_BRCA | Man page |
| TCGA_BRCA_Data | Man page |
| bioDist | Man page |
| bioDist,character,character,bioMap,ExpressionSet,ExpressionSet-m | Man page |
| bioDistFeature | Man page |
| bioDistFeature,character,list,numeric-method | Man page |
| bioDistFeaturePlot | Man page |
| bioDistW | Man page |
| bioDistW,character,list,matrix-method | Man page |
| bioDistWPlot | Man page |
| bioDistWPlot,character,list,character-method | Man page |
| bioDistclass | Man page Source code |
| bioMap | Man page Source code |
| caClass-class | Man page |
| combiningMappings | Man page Source code |
| combiningPvalues | Source code |
| computeAssocContinuousData | Source code |
| computeAssocCountData | Source code |
| computeAssociation | Source code |
| computePvaluesVect | Source code |
| createOmicsExpressionSet | Man page |
| createOmicsExpressionSet,matrix-method | Man page |
| ed | Man page |
| ed.PCA | Man page |
| g_legend | Source code |
| generate_iid_data_index | Source code |
| getInitialData | Man page |
| getInitialData,caClass-method | Man page |
| getLoadings | Man page |
| getLoadings,caClass-method | Man page |
| getMethodInfo | Man page |
| getMethodInfo,caClass-method | Man page |
| getPreprocessing | Man page |
| getPreprocessing,caClass-method | Man page |
| getScores | Man page |
| getScores,caClass-method | Man page |
| getVAF | Man page |
| getVAF,caClass-method | Man page |
| holistOmics | Man page |
| holistOmics,list,character-method | Man page |
| mapdata | Man page |
| modelSelection | Man page |
| modelSelection,list,numeric,character-method | Man page |
| omicsCompAnalysis | Man page |
| omicsCompAnalysis,list,character,character,numeric,numeric-metho | Man page |
| omicsNPC | Man page |
| omicsNPC,list,data.frame-method | Man page |
| omicsNPC,list,missing-method | Man page |
| omicsNPC_internal | Source code |
| permutingData | Source code |
| plotRes | Man page |
| plotRes,caClass,numeric,character,character,logical-method | Man page |
| plotVAF | Man page |
| plotVAF,caClass-method | Man page |
| statisticsToPvalues | Source code |
