lwaldron/doppelgangR: Identify likely duplicate samples from genomic or meta-data
Version 1.9.5

The main function is doppelgangR(), which takes as minimal input a list of ExpressionSet object, and searches all list pairs for duplicated samples. The search is based on the genomic data (exprs(eset)), phenotype/clinical data (pData(eset)), and "smoking guns" - supposedly unique identifiers found in pData(eset).

Getting started

Package details

Bioconductor views GeneExpression Microarray QualityControl RNASeq
Maintainer
LicenseGPL (>=2.0)
Version1.9.5
URL https://github.com/lwaldron/doppelgangR
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("lwaldron/doppelgangR")
lwaldron/doppelgangR documentation built on May 19, 2018, 4:40 a.m.