Description Usage Arguments Value Author(s)
Reads a gmt (gene matrix transposed) file as provided by mSigDB or geneSigDB, to an R list object.
1 | readGMT(fname, name.column = 1)
|
fname |
fully specified path to a .gmt file, ie from mSigDB or geneSigDB |
name.column |
name.column = which column to use for names (typically 1 or 2). |
a list object where each element is a string of genes, and the elements are named by the first column of the .gmt file.
Princy Parsana and Levi Waldron
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