wt_summarise_cam: Set of analysis functions

In mabecker89/wildRtrax: Environmental sensor data management and analytics to and from WildTrax

Set of analysis functions

Description

This function takes your independent detection data and summarises it by location, specified time interval, and species.

Usage

wt_summarise_cam(
  detect_data,
  raw_data,
  time_interval = "day",
  variable = "detections",
  output_format = "wide",
  species_col = species_common_name,
  effort_data = NULL,
  project_col = NULL,
  station_col = NULL,
  start_col = NULL,
  end_col = NULL
)

Arguments

detect_data	Detection data generated from wt_ind_det().
raw_data	The raw camera tag data, which is used to infer the effort (i.e. date ranges of operation) for each camera. Optionally, can supply effort_data directly instead.
time_interval	Character; Can be either "full", "month", "week", or "day".
variable	Character; Can be either "presence", "detections", "counts", or "all" (if you want all three).
output_format	Character; The format of the dataframe returned to you. Can be either "wide" or "long".
species_col	Defaults to common_name. The column referring to species. Use to switch between common and scientific names of species, if you have both.
effort_data	Optionally supply your own effort data.
project_col	The column referring to project in your effort data.
station_col	The column referring to each individual camera station/location in your effort data.
start_col	The column indicating the start date of the camera location
end_col	The column indicating the end date of the camera location

Value

A dataframe summarising your camera data by location, time interval, and species.

Summarise your camera data by location, time interval, and species.

NA

Examples

## Not run: 
summary <- wt_summarise_cam(
x, y, time_interval = "day", variable = "detections", output_format = "wide"
)

## End(Not run)

mabecker89/wildRtrax documentation built on Feb. 5, 2024, 8:50 a.m.