Files in mackerman44/telemetyr
Tools for processing, analysis, and visualization of telemetry data
.Rbuildignore
.gitattributes
.gitignore
DESCRIPTION
JAGS_CJS/AFS19-JAGS2.pdf
JAGS_CJS/Bayesian II Presentation.pptx
JAGS_CJS/Exercise_2_6_1_code.R
JAGS_CJS/Exercise_2_6_2_code.R
JAGS_CJS/Exercise_2_6_3_code.R
JAGS_CJS/Exercise_2_6_data.csv
JAGS_CJS/model.txt
LICENSE
NAMESPACE
R/clean_raw_data.R
R/compress_raw_data.R
R/compress_txt_data.R
R/data.R
R/first_alive.R
R/fit_bayes_cjs.R
R/fix_bad_dates.R
R/get_file_nms.R
R/known_alive.R
R/known_alive_vec.R
R/parse_code_ending.R
R/parse_tag_list.R
R/plot_obs_movement.R
R/plot_volt_temp_data.R
R/prep_capture_history.R
R/prep_jags_cjs.R
R/read_csv_data.R
R/read_on_off_data.R
R/read_txt_data.R
R/read_volt_temp_data.R
R/remove_upstrm_dets.R
R/round_tag_codes.R
R/run_jags_cjs.R
R/summarise_jags_cjs.R
R/summarise_movement.R
R/summarise_noise_data.R
R/summarise_test_data.R
R/summarise_timer_data.R
R/write_bayes_cjs.R
README.md
analysis/CJS_models/CJS_model.txt
analysis/CJS_models/PIT_only_CJS_2017.rda
analysis/CJS_models/PIT_only_CJS_2018.rda
analysis/CJS_models/RT_only_CJS_all.rda
analysis/RT Objectives & Analyses 20181108.docx
analysis/Telemetry Filtering Standard Operating Procedure.docx
analysis/fit_cjs_model.R
analysis/movement_rates.R
analysis/plot_movement.R
analysis/prep_hab_data.R
analysis/read_save_data_all_seasons.R
analysis/test_depth_vel_sample_xs.R
analysis/writeups/CJS_model.txt
analysis/writeups/PIT_CJS.Rmd
analysis/writeups/PIT_CJS.html
analysis/writeups/RT_CJS.Rmd
analysis/writeups/RT_CJS.docx
analysis/writeups/RT_CJS.html
analysis/writeups/figures/det-fig-1.png
analysis/writeups/figures/phi-fig-1.png
analysis/writeups/figures/surv-fig-1.png
analysis/writeups/figures/surv2-fig-1.png
analysis/writeups/templates/author-info-blocks.lua
analysis/writeups/templates/scholarly-metadata.lua
data-raw/CJS_model.txt
data-raw/ch_long.R
data-raw/ch_long.csv
data-raw/ch_wide.R
data-raw/ch_wide.csv
data-raw/cjs_post.R
data-raw/cjs_post.csv
data-raw/compressed.R
data-raw/compressed.csv
data-raw/raw.R
data-raw/raw.csv
data-raw/site_metadata.R
data-raw/site_metadata.csv
data-raw/tag_releases.R
data-raw/tag_releases.csv
data-raw/volt_temp.R
data-raw/volt_temp.csv
data/ch_long.rda
data/ch_wide.rda
data/cjs_post.rda
data/compressed.rda
data/raw.rda
data/site_metadata.rda
data/tag_df.rda
data/tag_releases.rda
data/volt_temp.rda
inst/CITATION
inst/scripts/workflow_script.R
man/ch_long.Rd
man/ch_wide.Rd
man/clean_raw_data.Rd
man/compress_raw_data.Rd
man/compress_txt_data.Rd
man/compressed.Rd
man/first_alive.Rd
man/fit_bayes_cjs.Rd
man/fix_bad_dates.Rd
man/get_file_nms.Rd
man/known_alive.Rd
man/known_alive_vec.Rd
man/parse_code_ending.Rd
man/parse_tag_list.Rd
man/plot_obs_movement.Rd
man/plot_volt_temp_data.Rd
man/prep_capture_history.Rd
man/prep_jags_cjs.Rd
man/raw.Rd
man/read_csv_data.Rd
man/read_on_off_data.Rd
man/read_txt_data.Rd
man/read_volt_temp_data.Rd
man/remove_upstrm_dets.Rd
man/round_tag_codes.Rd
man/run_jags_cjs.Rd
man/site_metadata.Rd
man/summarise_jags_cjs.Rd
man/summarise_movement.Rd
man/summarise_noise_data.Rd
man/summarise_test_data.Rd
man/summarise_timer_data.Rd
man/tag_releases.Rd
man/volt_temp.Rd
man/write_bayes_cjs.Rd
telemetyr.Rproj
vignettes/.gitignore
vignettes/CJS.Rmd
vignettes/Data_Prep.Rmd
vignettes/Diagnostics.Rmd
